GlyTouCan RDF schema
Edited: 9/27/2016
GlyTouCan RDF using several classes which in GlycoRDF ontology.
PREFIX glycan: http://purl.jp/bio/12/glyco/glycan#
- glycan:saccharide
- glycan:resouece_entry
- glycan:glycosequence
- glycan:glycan_motif
- glycan:component
- glycan:monosaccharide
GRAPH: <http://rdf.glytoucan.org/core>
- glycan:saccharide
- glycan:resouece_entry
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix glycan: <http://purl.jp/bio/12/glyco/glycan#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix dcterms: <http://purl.org/dc/terms/> .
@prefix glytoucan: <http://www.glytoucan.org/glyco/owl/glytoucan#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
<http://rdf.glycoinfo.org/glycan/G04563PI>
rdf:type glycan:saccharide ;
glycan:has_resource_entry <http://rdf.glycoinfo.org/resource-entry/G04563PI> ;
glytoucan:has_primary_id "G04563PI" .
<http://rdf.glycoinfo.org/resource-entry/G04563PI>
rdf:type glycan:resource_entry .
<http://rdf.glycoinfo.org/resource-entry/G04563PI>
rdfs:seeAlso <https://glytoucan.org/Structures/Glycans/G04563PI> .
<http://rdf.glycoinfo.org/resource-entry/G04563PI>
dcterms:identifier "G04563PI" .
<http://rdf.glycoinfo.org/resource-entry/G04563PI>
glycan:in_glycan_database glytoucan:database_glytoucan .
<http://rdf.glycoinfo.org/resource-entry/G04563PI>
glytoucan:date_registered "2015-10-08 16:23:49.714"^^xsd:dateTimeStamp ;
glytoucan:contributor <http://rdf.glycoinfo.org/glytoucan/contributor/userId/5854> .
GRAPH <http://rdf.glytoucan.org/sequence/wurcs>
This graph is included WURCS RDF.
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix glycan: <http://purl.jp/bio/12/glyco/glycan#> .
@prefix wurcs: <http://www.glycoinfo.org/glyco/owl/wurcs#> .
<http://rdf.glycoinfo.org/glycan/G21664CH>
rdf:type glycan:saccharide ;
glycan:has_glycosequence <http://rdf.glycoinfo.org/glycan/G21664CH/wurcs/2.0> .
<http://rdf.glycoinfo.org/glycan/G21664CH/wurcs/2.0>
rdf:type glycan:glycosequence ;
rdfs:label "WURCS=2.0/5,5,5/[h444h][a2112h-1b_1-5_6*OPO/3O/3=O][a2112h-1a_1-5_2*N][a2112m-1a_1-5_2*NCC/3=O_4*N][a2122h-1b_1-5]/1-2-3-4-5/a1-b1_b3-c1_c4-d1_d3-e1_a5-e6*OPO*/3O/3=O~n"^^xsd:string ;
owl:sameAs <http://rdf.glycoinfo.org/glycan/wurcs/2.0/WURCS%3D2.0%2F5%2C5%2C5%2F%5Bh444h%5D%5Ba2112h-1b_1-5_6%2AOPO%2F3O%2F3%3DO%5D%5Ba2112h-1a_1-5_2%2AN%5D%5Ba2112m-1a_1-5_2%2ANCC%2F3%3DO_4%2AN%5D%5Ba2122h-1b_1-5%5D%2F1-2-3-4-5%2Fa1-b1_b3-c1_c4-d1_d3-e1_a5-e6%2AOPO%2A%2F3O%2F3%3DO%7En> ;
glycan:has_sequence "WURCS=2.0/5,5,5/[h444h][a2112h-1b_1-5_6*OPO/3O/3=O][a2112h-1a_1-5_2*N][a2112m-1a_1-5_2*NCC/3=O_4*N][a2122h-1b_1-5]/1-2-3-4-5/a1-b1_b3-c1_c4-d1_d3-e1_a5-e6*OPO*/3O/3=O~n"^^xsd:string ;
glycan:in_carbohydrate_format glycan:carbohydrate_format_wurcs ;
wurcs:LIN_count 5 ;
wurcs:RES_count 5 ;
wurcs:has_LIN <http://rdf.glycoinfo.org/glycan/G21664CH/wurcs/2.0/LIN/a5-e6%2AOPO%2A%2F3O%2F3%3DO%7En> ;
wurcs:has_basetype <http://rdf.glycoinfo.org/glycan/wurcs/2.0/Basetype/u2112h_2%2AN> ;
wurcs:has_monosaccharide <http://rdf.glycoinfo.org/glycan/wurcs/2.0/Monosaccharide/a2122h-1b_1-5> ;
wurcs:has_root_RES <http://rdf.glycoinfo.org/glycan/G21664CH/wurcs/2.0/RES/a> ;
wurcs:has_uniqueRES <http://rdf.glycoinfo.org/glycan/G21664CH/wurcs/2.0/UniqueRES/1> ;
wurcs:uniqueRES_count 5 ;
wurcs:has_root_GRES <http://rdf.glycoinfo.org/glycan/G21664CH/wurcs/2.0/GRES/1> ;
wurcs:has_GRES <http://rdf.glycoinfo.org/glycan/G21664CH/wurcs/2.0/GRES/1> ;
wurcs:count_RES 5 ;
wurcs:count_uniqueRES 5 ;
wurcs:count_LIN 5 .
<http://rdf.glycoinfo.org/glycan/G21664CH/wurcs/2.0/LIN/a5-e6%2AOPO%2A%2F3O%2F3%3DO%7En>
rdf:type wurcs:LIN ;
wurcs:has_GLIPS <http://rdf.glycoinfo.org/glycan/wurcs/2.0/GLIPS/a5> ;
wurcs:has_rep_max -1 ;
wurcs:has_rep_min -1 ;
wurcs:is_repeat "true"^^xsd:boolean ;
wurcs:has_MAP "*OPO*/3O/3=O"^^xsd:string .
<http://rdf.glycoinfo.org/glycan/G21664CH/wurcs/2.0/UniqueRES/1>
rdf:type wurcs:UniqueRES ;
wurcs:is_monosaccharide <http://rdf.glycoinfo.org/glycan/wurcs/2.0/Monosaccharide/h444h> .
<http://rdf.glycoinfo.org/glycan/G21664CH/wurcs/2.0/RES/a>
rdf:type wurcs:RES ;
wurcs:has_LIN <http://rdf.glycoinfo.org/glycan/G21664CH/wurcs/2.0/LIN/a5-e6%2AOPO%2A%2F3O%2F3%3DO%7En> ;
wurcs:is_uniqueRES <http://rdf.glycoinfo.org/glycan/G21664CH/wurcs/2.0/UniqueRES/1> .
<http://rdf.glycoinfo.org/glycan/G21664CH/wurcs/2.0/GRES/1>
wurcs:is_monosaccharide <http://rdf.glycoinfo.org/glycan/wurcs/2.0/Monosaccharide/h444h> ;
wurcs:is_acceptor_of <http://rdf.glycoinfo.org/glycan/G21664CH/wurcs/2.0/GLIN/1> ;
wurcs:is_donor_of <http://rdf.glycoinfo.org/glycan/G21664CH/wurcs/2.0/GLIN/5> .
<http://rdf.glycoinfo.org/glycan/G21664CH/wurcs/2.0/GLIN/1>
wurcs:has_MAP ""^^xsd:string .
<http://rdf.glycoinfo.org/glycan/G21664CH/wurcs/2.0/GLIN/5>
wurcs:has_MAP "*OPO*/3O/3=O"^^xsd:string .