Input

Sample Accession number : G00048MO
VALUES ?AccessionNumber { "G00048MO" }

Output

Variable Data
?endpoint UniCarbKB SPARQL Endpoint
PREFIX glycan: <http://purl.jp/bio/12/glyco/glycan#>
PREFIX api: <http://purl.org/linked-data/api/vocab#>

SELECT DISTINCT (str(?uri) AS ?endpoint)
FROM <http://purl.jp/bio/12/glyco/glycan#>
WHERE{
  glycan:database_unicarbkb api:sparqlEndpoint ?uri .
}

Input

?endpointの変数に入ったURIです。 [input sparqlEndpoint]?endpointの値を挿入します。

Output

| Variable | Data| |———-|—–| | ?url | UniCarbKB Entry URL | | ?structure_id | UniCarbKB Structure ID |

PREFIX glyco: <http://purl.jp/bio/12/glyco/glycan/>
PREFIX glycan: <http://purl.jp/bio/12/glyco/glycan#>
PREFIX dcterms: <http://purl.org/dc/terms/>
PREFIX glytoucan: <http://www.glytoucan.org/glyco/owl/glytoucan#>

SELECT DISTINCT  ?structure_id ?url
WHERE{
?glycan glytoucan:has_primary_id ?accNum FILTER(?accNum = "Input Accession Number")  .
SERVICE SILENT [input sparqlEndpoint] {
?entry dcterms:identifier ?accNum .
?entry glyco:in_glycan_database glytoucan:database_glytoucan  .
?refcomp glyco:has_resource_entry ?entry .
?refcomp glyco:has_resource_entry ?kb_entry .
?kb_entry dcterms:identifier ?structure_id .
?kb_entry glyco:in_glycan_database glyco:database_unicarbkb  .
}
BIND(CONCAT("http://www.unicarbkb.org/structure/", ?structure_id) AS ?url)
}